BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C02LP1|AL428685
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1556 1695 0.0
>3x_Contig1556
Length = 10874
Score = 1695 bits (855), Expect = 0.0
Identities = 873/877 (99%), Gaps = 2/877 (0%)
Strand = Plus / Minus
Query: 1 gatctttaattctttcttcaataactatacctacaatattgaaaattcaccatttgccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8861 gatctttaattctttcttcaataactatacctacaatattgaaaattcaccatttgccag 8802
Query: 61 aattggtccatgtactggaaccgaagggnctgggcagaaactctggtcccagcctaggca 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8801 aattggtccatgtactggaaccgaaggggctgggcagaaactctggtcccagcctaggca 8742
Query: 121 ttggttctgtgaatctgaattccagcctggagggagagtttcctgggcaggactaggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8741 ttggttctgtgaatctgaattccagcctggagggagagtttcctgggcaggactaggaaa 8682
Query: 181 gccggacagagagactctgtgtctcagctccccctggcagaacggctcagtcttagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8681 gccggacagagagactctgtgtctcagctccccctggcagaacggctcagtcttagagga 8622
Query: 241 aaggaatatcggcagggggacgtctgcccaggacacccagccttaccacaattggactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8621 aaggaatatcggcagggggacgtctgcccaggacacccagccttaccacaattggactgc 8562
Query: 301 cttgtgtaagtttttctgaaaaagtttatgtgtattaccttaaacagtaataatgtataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8561 cttgtgtaagtttttctgaaaaagtttatgtgtattaccttaaacagtaataatgtataa 8502
Query: 361 ccaaattccaaaaatatataanatacattgaggtacggatgtaaggtggaacagtcacat 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 8501 ccaaattccaaaaatatataaaatacattgaggtacggatgtaaggtggaacagtcacat 8442
Query: 421 aatctgttattgtgtacttgctgatgttgaatgtgtcactaatgaatttattgactgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8441 aatctgttattgtgtacttgctgatgttgaatgtgtcactaatgaatttattgactgatt 8382
Query: 481 gactgatcgcccgatgactgttttgttgcattttacgtagaaaagcatgttgtttatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8381 gactgatcgcccgatgactgttttgttgcattttacgtagaaaagcatgttgtttatgaa 8322
Query: 541 accatagttatataattgatagaagtagtaatgctagtagtatgtgtattaggctgcgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8321 accatagttatataattgatagaagtagtaatgctagtagtatgtgtattaggctgcgac 8262
Query: 601 ctgttctacaggttgttgagattctaattgagactctgcatttgaattaagtaatggatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8261 ctgttctacaggttgttgagattctaattgagactctgcatttgaattaagtaatggatt 8202
Query: 661 gtcctgcgatgctgtcacaccatcttcctggtcgataagcggttcggcattggcctcggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8201 gtcctgcgatgctgtcacaccatcttcctggtcgataagcggttcggcattggcctcggg 8142
Query: 721 ctccaccacagcaccgtcattaccgtcagcttgtggttgaggattt-cctcgataggaat 779
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8141 ctccaccacagcaccgtcattaccgtcagcttgtggttgaggatttccctcgataggaat 8082
Query: 780 tgccgcaacagcattagctgtatcaggttcatctcctgttaccccagcatctgctgggan 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8081 tgccgcaacagcattagctgtatcaggttcatctcctgttaccccagcatctgctggga- 8023
Query: 840 tttcgttgttgccttccgcggactctccattagtgtt 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 8022 tttcgttgttgccttccgcggactctccattagtgtt 7986
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5213
Number of Sequences: 1807
Number of extensions: 5213
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)